The GMFH editing team recommends these book selections on the topic.

If you find yourself wanting to dig deep into the topic of gut microbiota, you’re not alone! Thousands of readers around the world are availing themselves of the growing list of resources on this fascinating topic. It’s important to know, though, that not all of the existing books about gut microbiota contain reliable scientific information. Check out this list of book picks from the GMFH publishing team, full of quality information that will help you learn more about your remarkable ‘hidden organ’.


Follow Your Gut: The Enormous Impact of Tiny Microbes (also available in French and Spanish)

By Rob Knight and Brendan Buhler

With the help of journalist Brendan Buhler, University of California San Diego (UCSD) researcher and Rob Knight—whom colleagues refer to as a “bioinformatics genius”—has penned an enthusiastic ode to the microbes inhabiting the human body. The book, which is based on Knight’s one-time TED talk, is a short and snappy overview of how microbes affect health. The book has a brief section on how to ‘hack’ your microbiome, with predictions about how we’ll make use of our microbial knowledge in the future. See the GMFH review of Follow Your Gut here.


The Good Gut: Taking control of your weight, your mood, and your long-term health (also available in French and Spanish)

By Justin and Erica Sonnenburg

Stanford University scientists Justin and Erica Sonnenburg are the power couple of fibre. Not only is their lab producing some of the most cutting-edge work on how fibre affects health through the gut microbiota, but they have also taken on the task of describing, in their book, how they are putting their knowledge into practice as they raise their two young daughters. The book is a smart summary of current research on diet and gut microbiota, with practical messages that jive with the science. See here for a New York Magazine book review and profile of the Sonnenburg family.


Gut: The Inside Story of Our Body’s Most Underrated Organ (also available in French and Spanish)

By Giulia Enders

Enthusiasm is the finest feature of this international bestseller. Enders, a medical student in Germany, believes the gut is the body’s most underappreciated organ and sets out to showcase its impressively complicated functions in this quirky and engaging book. See here for a New York Times book review and author profile.


Microbiota, these bacteria that do us good (also available in French and Spanish)


10% Human: How Your Body’s Microbes Hold the Key to Health and Happiness (also available in French)

By Alanna Collen

Science writer Alanna Collen uses her own near-death experience to open this exploration of the gut microbiota’s role in the growing prevalence of chronic diseases. In an engaging and organized way, she outlines the possible reasons why conditions like allergies, autoimmune diseases, digestive issues, brain disorders, and obesity have spiked in the last century—pointing out that in the same period we have embraced a number of practices that negatively affect our microbial communities. See the GMFH review of 10% Human here.


Missing Microbes: How the overuse of antibiotics is fueling our modern plagues (also available in French)

By Martin Blaser

In this book, New York University scientist Martin Blaser engagingly details the growing evidence that the overuse of antibiotics is having serious unintended consequences, even beyond the well-known global threat of antibiotic resistance. Blaser puts forward the idea that, while antibiotics are great at killing bacteria when the stakes are high, widespread inappropriate use is causing the extinction of some important bacterial species in the gut, with negative consequences for our long-term health. See the GMFH review of Missing Microbes here.


The Mind-Gut Connection: How the Hidden Conversation Within Our Bodies Impacts Our Mood, Our Choices, and Our Overall Health (also available in French)

By Emeran Mayer

Gastroenterologist and University of California Los Angeles (UCLA) professor of medicine Emeran Mayer always felt something was wrong with the longstanding medical separation of gut and brain symptoms. So he decided to study it. In this book, he takes readers on a journey deep inside the body, from the brain to the gut and back again. He outlines what scientists currently know about the gut-brain axis and how the gut microbiota affects it—through what he calls “microbe-speak”. Mayer also provides measured practical advice for those who want to make the most of their brain health. See the GMFH review of The Mind-Gut Connection here.


I, Superorganism: Learning to Love Your Inner Ecosystem (also available in Spanish)

By Jon Turney

In one of the first books published on this broad topic, academic-turned-science-communicator Jon Turney gives an overview of the human microbiome in biology. Described in one review as a “terrific romp through our non-human inhabitants”, this engaging book was shortlisted for the Royal Society of Biology book award.



The Well-Fed Microbiome Cookbook: Vital Microbiome Diet Recipes to Repair and Renew the Body and Brain (only available in English)

By Kristina Campbell

In this book, which has a foreword written by Justin & Erica Sonnenburg (authors of The Good Gut, above), science writer Campbell gives a brief introduction to gut microbiome research and provides a practical take on supporting gut health through diet. The cookbook contains more than 150 easy-to-follow recipes. See the GMFH interview with The Well-Fed Microbiome author here.


L’intestin, notre deuxième cerveau: Comprendre son rôle clé et préserver sa santé (only available in French and Spanish)

By Francisca Joly Gomez

In this book, nutrition professor and gastroenterologist Francisca Joly Gomez explores the intestines, with their complement of microbes, as the “second brain”. An introduction to the complex links between the gastrointestinal tract, the brain, and other organs of the body, the book includes nutritional recommendations and recipes that Gomez says will assist in reclaiming health through diet.


Mille milliards d’amies : Comprendre et nourrir son microbiome (only available in French)

By Marianne Desautels-Marissal

In her new publication, chroniqueuse scientifique Desautels-Marissal makes microbiome science both fun and accessible. The book, somewhat like Rob Knight’s Follow your gut in design and tone, provides a quick overview of what microbes do for your body and how you can feed them properly. The book also includes an attractive collection of recipes—with high-fiber and fermented foods—for nourishing the gut microbiome.


L’Homme microbiotique (only available in French)

By Patrice Debré

Professor of immunology Patrice Debré reminds us in this book that a multitude of bacteria live “pour lui et avec lui” and that they require us to re-think the long-held view of microbes as primarily harmful to our health. Debré describes findings that show the intimate connection between the microbiota and the immune system; this wide-ranging book includes detailed descriptions of data and is enriched by observations about general culture and the history of medicine.


Les bactéries, des amis qui vous veulent du bien (only available in French)

By Gabriel Perlemuter and Anne-Marie Cassard, 2016

Two researchers from INSERM (Institut national de la santé et de la recherche médicale, France) give an overview of the human microbiome in this book, detailing how modern societies are increasingly unfriendly toward our microbial partners. In a passionate and engaging way the scientists map out the possible consequences of dysbiosis—and importantly, how to make things better in a world that has become so overwhelmingly hostile to microbes.


Qu’est ce que tu as dans le ventre ? (only available in French)

By Philippe Godeberge and Caroline Balma-Chaminadour, 2017

Gastroenterologist Philippe Godeberge teams up with journalist Caroline Balma-Chaminadour to write this book, which emphasizes how closely our moods and emotions are linked with digestive symptoms. The authors stress the need to understand how the digestive system works; in addition to highlighting the gut’s interface with the immune system, they cover the intestinal microbiota as a key factor in smooth digestion. See here for a podcast that features Dr. Godeberge talking about the book.

For a more specialized reading on the gut microbiota you can also check out the GMFH Research & Practice book picks, selected for scientists and health professionals!